Sitemap
A list of all the posts and pages found on the site. For you robots out there, there is an XML version available for digesting as well.
Pages
Jackie's Homepage
About me
Posts
Future Blog Post
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Blog Post number 4
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This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
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Blog Post number 2
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Blog Post number 1
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This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2 
publications
Competition of SARS-CoV-2 Variants on the Pandemic Transmission Dynamics
Published in Chaos, Solitons and Fractals, 2023
| First Author | Chaos, Solitons and Fractals (2023) | IF: 9.9 · Citations: 30 · Rank #1/81 in Mathematical Physics — ODE-based multi-variant competition model that outperforms deep learning baselines in predicting COVID-19 transmission dynamics. |
Recommended citation: Chen, J., Gu, C., Ruan, Z., & Tang, M. (2023). "Competition of SARS-CoV-2 Variants on the Pandemic Transmission Dynamics." Chaos, Solitons and Fractals, 169, 113193.
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Modeling and Analysis of COVID-19 Spreading Dynamics Based on Complex Network Theory
Submitted to Europhysics Letters · 2023
| Co-Author | Europhysics Letters (Submitted) | IF: 1.8 · Rank #49/110 in Physics, Multidisciplinary — A comprehensive review of network-based mathematical modeling approaches for COVID-19 spreading dynamics. |
Recommended citation: Gu, C., Chen, J., Ruan, Z., & Tang, M. (2023). "Modeling and Analysis of COVID-19 Spreading Dynamics Based on Complex Network Theory." Europhysics Letters (Submitted).
Unraveling the Impact of Non-Pharmaceutical Interventions on Pathogen Mutation
Under review at Nature Communications · 2024
| First Author | Nature Communications (Under Review) | IF: 16.6 · Rank #8/135 in Multidisciplinary Sciences — A novel Bayesian machine learning framework linking macroscopic public health policies to microscopic pathogen evolutionary dynamics. |
Recommended citation: Chen, J., Wang, D., Wu, P., Cowling, B. J., & Ali, S. T. (2024). "Unraveling the Impact of Non-Pharmaceutical Interventions on Pathogen Mutation." Nature Communications (Under Review).
Collective Interactions, Human Mobility and Viral Evolution Shaped the SARS-CoV-2 Transmission in Mainland China
Preprint · medRxiv · 2025
| Co-Author | medRxiv preprint (Under Revision) — A spatial higher-order modeling framework integrating human mobility, viral evolution, and collective interactions to explain SARS-CoV-2 transmission heterogeneity across mainland China. |
Recommended citation: Wang, D., Wang, Y., Gressani, O., Chen, J., Tao, Y., Wang, H., Li, S., Chen, D., Lau, E. H. Y., Zhao, Y., Wu, P., Zhang, Q., Cowling, B. J., & Ali, S. T. (2025). "Collective Interactions, Human Mobility and Viral Evolution Shaped the SARS-CoV-2 Transmission in Mainland China." medRxiv preprint.
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Predicting the Time-Varying Population Immunity and Importation Risk and Their Impact on Co-Circulation of Influenza and COVID-19 in Hong Kong
Manuscript under submission · target: Nature Human Behaviour · 2026
| First Author | Manuscript Under Submission · target: Nature Human Behaviour — Benchmarks three Bayesian transmission models — fully mechanistic, semi-mechanistic, and purely statistical — against multi-source surveillance data to reconstruct 15 years of subtype-specific influenza immunity in Hong Kong and quantify a durable post-pandemic regime change in influenza–COVID-19 co-circulation. |
Recommended citation: Chen, J., Wang, H., Wang, D., Lau, Y. C., Hossain, M. P., Ryu, S., Wu, P., Opatowski, L., Cowling, B. J., & Ali, S. T. (2026). "Predicting the time-varying population immunity and importation risk and their impact on co-circulation of influenza and COVID-19 in Hong Kong." Manuscript under submission.
talks
Talk 1 on Relevant Topic in Your Field
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Conference Proceeding talk 3 on Relevant Topic in Your Field
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This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
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